The area around the top opening and 1/4 window opening is A LOT different on a vert versus a hardtop and will require A LOT of work in areas with compound curves to pull it off.

IMO , and without seeing the 2 quarters side by side it's going to be a tossup, but a real good metal man can make either one look nice.
IMO ,,,, I think if you already have the skins I'd use them. OR buy the AMD panel and cut it along to the top similar to the skin anyway.

And is't AMD now offering a skin based on they're full panel anyway?

Again,,,,,I'm not a body man so it's just an educated guess. But I know someone who did use a full hardtop panel on a vert and it was a LOT of work- it was a 69 Plymouth B-body btw