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Paint your car with the fenders and doors bolted on and adjusted already just like the factory did. It's not any harder to paint and your going to have to bolt all those parts on anyway. It has benefits too as to showing fitment problems BEFORE everything is color coated. Things like the hood and decklid I paint off the car. I bolt them on with "temporary bolts" with tape UNDER the washer for adjusting, then when it's all lined up I swap out the bolts one by one for a "colored correct" bolt.